STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95583.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
KRK95582.1
Hypothetical protein.
     0.957
KRK95585.1
GntR family transcriptional regulator.
 
     0.947
KRK95581.1
Metal-dependent hydrolase with the TIM-barrel fold.
 
     0.891
KRK95578.1
Mutase.
 
     0.866
KRK95579.1
Amino acid racemase.
 
     0.866
KRK95580.1
Cystathionine beta-lyase family protein.
 
     0.866
KRK95584.1
Hypothetical protein.
       0.792
Your Current Organism:
Lactobacillus futsaii
NCBI taxonomy Id: 1423818
Other names: L. futsaii JCM 17355, Lactobacillus futsaii JCM 17355, Lactobacillus futsaii YM 0097, Lactobacillus sp. YM 0097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.