STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95435.1TetR family transcriptional regulator. (186 aa)    
Predicted Functional Partners:
KRK95436.1
Hypothetical protein.
 
     0.781
KRK95437.1
Hypothetical protein.
 
 
   0.703
KRK95430.1
Transcriptional regulator.
  
     0.563
KRK90729.1
Transcriptional regulator (Xre family).
  
     0.529
KRK95434.1
Amino acid permease.
       0.529
KRK91180.1
Hypothetical protein.
  
     0.456
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.412
KRK95332.1
Helix-turn-helix domain-containing protein.
  
     0.401
Your Current Organism:
Lactobacillus futsaii
NCBI taxonomy Id: 1423818
Other names: L. futsaii JCM 17355, Lactobacillus futsaii JCM 17355, Lactobacillus futsaii YM 0097, Lactobacillus sp. YM 0097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.