STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95420.1Transport protein. (280 aa)    
Predicted Functional Partners:
KRK95419.1
Hypothetical protein.
 
  
 0.973
KRK95421.1
Hypothetical protein.
       0.825
KRK95422.1
Alpha beta fold family hydrolase.
       0.773
KRK95423.1
Major facilitator superfamily permease.
       0.751
KRK92871.1
Serine protease HtrA.
    
 
 0.642
KRK95424.1
Hypothetical protein.
       0.411
Your Current Organism:
Lactobacillus futsaii
NCBI taxonomy Id: 1423818
Other names: L. futsaii JCM 17355, Lactobacillus futsaii JCM 17355, Lactobacillus futsaii YM 0097, Lactobacillus sp. YM 0097
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.