STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM52606.1Tyrosine-protein kinase. (266 aa)    
Predicted Functional Partners:
KRM52607.1
Phosphotyrosine-protein phosphatase.
  
 0.997
KRM52605.1
Chain length regulator.
 
 0.987
KRM52602.1
Undecaprenyl-phosphate beta-glucosephosphotransferase.
  
 
 0.893
KRM51495.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.786
guaA
GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
 0.708
KRM53283.1
Non-specific serine threonine protein kinase.
   
 
 0.706
KRM52604.1
Hypothetical protein.
       0.657
KRM52617.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.611
KRM52603.1
Beta-lactamase class C-like penicillin binding protein.
       0.611
folD
Methylenetetrahydrofolate dehydrogenase (NADP+) methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
  0.607
Your Current Organism:
Lactobacillus aviarius
NCBI taxonomy Id: 1423820
Other names: L. aviarius subsp. araffinosus DSM 20653, Lactobacillus aviarius subsp. araffinosus DSM 20653
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