STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM51773.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
KRM53536.1
Branched-chain amino acid transport protein.
  
     0.769
KRM53535.1
LIV-E family branched chain amino acid permease AzlC.
  
     0.753
KRM53253.1
Hypothetical protein.
  
     0.744
KRM52267.1
Integrase recombinase xerD; Belongs to the 'phage' integrase family.
  
     0.667
KRM52632.1
Hypothetical protein.
  
     0.611
KRM52749.1
Cro CI family transcriptional regulator.
  
     0.547
KRM51826.1
Hypothetical protein.
  
     0.520
KRM53530.1
Hypothetical protein.
  
     0.496
KRM51862.1
Hypothetical protein.
  
     0.475
KRM51803.1
Hypothetical protein.
  
     0.458
Your Current Organism:
Lactobacillus aviarius
NCBI taxonomy Id: 1423820
Other names: L. aviarius subsp. araffinosus DSM 20653, Lactobacillus aviarius subsp. araffinosus DSM 20653
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.