STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM52003.1PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. (269 aa)    
Predicted Functional Partners:
rpsU
Hypothetical protein; Belongs to the bacterial ribosomal protein bS21 family.
     
 0.613
KRM52004.1
ATP-dependent helicase deoxyribonuclease subunit B; ATP-dependent DNA helicase.
       0.517
addA
ATP-dependent nuclease subunit A; ATP-dependent DNA helicase.
       0.517
KRM51686.1
Carboxy-cis,cis-muconate cyclase.
   
    0.440
KRM52007.1
GatB Yqey domain-containing protein.
       0.438
KRM52097.1
Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.405
Your Current Organism:
Lactobacillus aviarius
NCBI taxonomy Id: 1423820
Other names: L. aviarius subsp. araffinosus DSM 20653, Lactobacillus aviarius subsp. araffinosus DSM 20653
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