STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL32075.1Hypothetical protein. (216 aa)    
Predicted Functional Partners:
ureE
Urease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
       0.790
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.789
ureC
Urease subunit alpha.
       0.535
ureB
Urease subunit beta/urease subunit gamma/beta; Belongs to the urease beta subunit family.
       0.535
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
       0.525
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.518
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
       0.505
SHL86575.1
Periplasmic chaperone for outer membrane proteins Skp.
    
   0.420
SHM37161.1
Periplasmic chaperone for outer membrane proteins Skp.
    
   0.420
SHM37190.1
Periplasmic chaperone for outer membrane proteins Skp.
    
   0.420
Your Current Organism:
Chryseobacterium contaminans
NCBI taxonomy Id: 1423959
Other names: C. contaminans, CCM 8492, Chryseobacterium sp. C-26, LMG 27810, LMG:27810, strain C-26, strain C26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.