STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL44318.1Por secretion system C-terminal sorting domain-containing protein. (269 aa)    
Predicted Functional Partners:
SHL44284.1
Outer membrane receptor for ferrienterochelin and colicins.
   
   0.625
SHL44249.1
HmuY protein.
       0.539
SHL44218.1
Iron complex transport system substrate-binding protein.
       0.460
SHL44359.1
Por secretion system C-terminal sorting domain-containing protein.
       0.459
SHK79266.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
  0.454
SHL08971.1
Peptidase family S41.
   
  0.454
SHL53323.1
Aspartyl protease.
   
  0.454
SHL59984.1
Hypothetical protein.
   
  0.454
SHL90182.1
C-terminal processing protease CtpA/Prc, contains a PDZ domain.
   
  0.454
SHM10081.1
Astacin (Peptidase family M12A).
   
  0.454
Your Current Organism:
Chryseobacterium contaminans
NCBI taxonomy Id: 1423959
Other names: C. contaminans, CCM 8492, Chryseobacterium sp. C-26, LMG 27810, LMG:27810, strain C-26, strain C26
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