STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT68892.1Methyltetrahydrofolate--corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)    
Predicted Functional Partners:
AOT68891.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.993
AOT69486.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
AOT71231.1
Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.977
AOT71601.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
AOT73168.1
Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
AOT71207.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
AOT71579.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
AOT71605.1
Dimethylamine corrinoid protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
AOT70993.1
Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
AOT70824.1
Cobalamin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.948
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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