STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT69221.1Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
AOT69211.1
CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.967
AOT69222.1
Carbon-monoxide dehydrogenase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.960
AOT73019.1
acetyl-CoA synthase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.952
AOT69213.1
acetyl-CoA synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.939
AOT69217.1
5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.914
fhs
Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family.
     
 0.905
AOT73018.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
AOT69216.1
5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.
 
   
 0.820
AOT69212.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.819
AOT69206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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