STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT69907.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)    
Predicted Functional Partners:
AOT69906.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
AOT69905.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
AOT69908.1
D-proline reductase (dithiol) proprotein PrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
AOT73070.1
Proline reductase cluster protein PrdD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
AOT69904.1
Proline reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.911
AOT69903.1
Proline racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.
 
     0.889
AOT69902.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.887
AOT69909.1
Proline reductase-associated electron transfer protein PrdC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
AOT68965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.560
AOT70783.1
Proline dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.
  
     0.487
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.