STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (360 aa)    
Predicted Functional Partners:
AOT73208.1
Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AOT68789.1
Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
buk-2
Butyrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.
 
  
 
0.964
AOT70096.1
Branched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.931
AOT70095.1
succinyl-CoA--3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.916
AOT73041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.768
AOT70441.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.596
AOT71401.1
2-oxoacid:ferredoxin oxidoreductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.596
AOT72617.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.596
AOT71397.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.595
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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