STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT71462.1Aldehyde oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (910 aa)    
Predicted Functional Partners:
AOT68648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
AOT71983.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
AOT72529.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
AOT71468.1
Molybdenum dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.949
AOT71472.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.935
AOT71463.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.933
AOT71469.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.929
AOT71464.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
AOT73213.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.913
AOT71465.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.908
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.