STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT72712.1Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (606 aa)    
Predicted Functional Partners:
AOT72713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
pduE-2
Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.958
pduD-2
Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.936
pduC-2
Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.934
AOT71335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.909
AOT72708.1
Microcompartment protein PduB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.904
AOT72720.1
ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.884
pduD
Propanediol dehydratase; With PduCE catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.872
pduE
Propanediol dehydratase; With pduCD catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.869
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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