STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETF00373.1Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)    
Predicted Functional Partners:
ETF02572.1
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
ETF01539.1
Terephthalate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
ETF03789.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
  
 
 0.871
ETF03709.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
 
 
 0.845
ETF01837.1
CDP-6-deoxy-delta-3,4-glucoseen reductase; Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.844
ETF01480.1
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.814
ETF01537.1
Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.798
ETF00307.1
Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.782
ETF00832.1
Granule protein PhaP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
ETF01452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.744
Your Current Organism:
Advenella kashmirensis W13003
NCBI taxonomy Id: 1424334
Other names: A. kashmirensis W13003
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