STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM83316.1Di-and tricarboxylate transporter. (455 aa)    
Predicted Functional Partners:
SDM83236.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
 
   
 0.881
SDM83371.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
 
    0.805
SDM83275.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
 
     0.704
SDM80164.1
Multicomponent Na+:H+ antiporter subunit A.
  
  
 0.512
Your Current Organism:
Cryobacterium flavum
NCBI taxonomy Id: 1424659
Other names: C. flavum, CGMCC 1.11215, Cryobacterium flavum Liu et al. 2012, Cryobacterium sp. Hh8, NBRC 107879, strain Hh8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.