STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM68254.1(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. (351 aa)    
Predicted Functional Partners:
SEN70960.1
PTS lactose transporter subunit IIC; PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
  0.851
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.792
SEM70583.1
Fructokinase.
  
 
  0.780
SEM74988.1
Phosphoglucomutase.
   
 0.751
SEN01656.1
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.719
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.717
SEM76896.1
Mannitol 2-dehydrogenase.
    
  0.713
mtlD
D-mannitol 1-phosphate 5-dehydrogenase.
    
  0.713
SEN10448.1
L-threonine ammonia-lyase.
   
 
  0.713
gap
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
  0.704
Your Current Organism:
Cryobacterium luteum
NCBI taxonomy Id: 1424661
Other names: C. luteum, CGMCC 1.11210, Cryobacterium luteum Liu et al. 2012, Cryobacterium sp. Hh15, Cryobacterium sp. Hh40-2, NBRC 107880, strain Hh15
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