STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM83547.1Glycosyltransferase, GT2 family. (317 aa)    
Predicted Functional Partners:
SEM84082.1
Hypothetical protein.
 
    0.937
SEM84022.1
Glycosyltransferase, GT2 family.
 
  
  0.916
SEM94882.1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
  
  
 
0.853
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.815
SEN40311.1
Beta-1,4-mannosyltransferase&#160.
 
    0.789
SEM84200.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.765
SEM83952.1
Hypothetical protein.
 
     0.657
SEM84159.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.646
SEN40281.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.601
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.600
Your Current Organism:
Cryobacterium luteum
NCBI taxonomy Id: 1424661
Other names: C. luteum, CGMCC 1.11210, Cryobacterium luteum Liu et al. 2012, Cryobacterium sp. Hh15, Cryobacterium sp. Hh40-2, NBRC 107880, strain Hh15
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