STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER49424.1Purine catabolism regulatory protein-like family protein. (562 aa)    
Predicted Functional Partners:
SER49498.1
N-Dimethylarginine dimethylaminohydrolase.
 
     0.686
SER51901.1
Purine catabolism regulatory protein.
 
     0.681
SER51816.1
Protein of unknown function.
 
     0.555
SER49449.1
Ornithine carbamoyltransferase.
 
     0.553
SER51802.1
FdrA protein.
 
     0.529
SER49484.1
Uncharacterized membrane protein YfcC, ion transporter superfamily.
 
     0.526
SER51830.1
Protein of unknown function.
 
     0.508
SER49390.1
Hypothetical protein.
       0.470
SER49409.1
Looped-hinge helix DNA binding domain-containing protein, AbrB family.
       0.470
SER49373.1
Hypothetical protein.
       0.461
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.