Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER63416.1 | SER63440.1 | SAMN04488559_102258 | SAMN04488559_102259 | Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. | Acetyltransferase (GNAT) family protein. | 0.455 |
SER63440.1 | SER63416.1 | SAMN04488559_102259 | SAMN04488559_102258 | Acetyltransferase (GNAT) family protein. | Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. | 0.455 |
SER63440.1 | SER63463.1 | SAMN04488559_102259 | SAMN04488559_102260 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.565 |
SER63440.1 | SER63484.1 | SAMN04488559_102259 | SAMN04488559_102261 | Acetyltransferase (GNAT) family protein. | Elongation factor Tu. | 0.561 |
SER63440.1 | lysA | SAMN04488559_102259 | SAMN04488559_103104 | Acetyltransferase (GNAT) family protein. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.420 |
SER63463.1 | SER63440.1 | SAMN04488559_102260 | SAMN04488559_102259 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.565 |
SER63463.1 | SER63484.1 | SAMN04488559_102260 | SAMN04488559_102261 | Hypothetical protein. | Elongation factor Tu. | 0.746 |
SER63484.1 | SER63440.1 | SAMN04488559_102261 | SAMN04488559_102259 | Elongation factor Tu. | Acetyltransferase (GNAT) family protein. | 0.561 |
SER63484.1 | SER63463.1 | SAMN04488559_102261 | SAMN04488559_102260 | Elongation factor Tu. | Hypothetical protein. | 0.746 |
lysA | SER63440.1 | SAMN04488559_103104 | SAMN04488559_102259 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Acetyltransferase (GNAT) family protein. | 0.420 |