STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER75455.1FMN reductase (NADPH); Belongs to the flavin oxidoreductase frp family. (248 aa)    
Predicted Functional Partners:
SER76126.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.815
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.609
SER82395.1
Nitroreductase.
   
 
 0.598
SER68554.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
 
      0.576
SER62868.1
ABC-2 type transport system permease protein.
  
  
 0.567
SER60167.1
NADPH2 dehydrogenase.
  
 
 0.548
SES09658.1
Lactoylglutathione lyase.
  
    0.539
SER80625.1
2-haloacid dehalogenase.
  
  
  0.537
SER49928.1
FMN reductase.
     
 0.521
SES04986.1
2,4-dienoyl-CoA reductase.
  
 
 0.517
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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