STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER78882.1Glycine betaine/proline transport system substrate-binding protein. (571 aa)    
Predicted Functional Partners:
SER78868.1
Glycine betaine/proline transport system ATP-binding protein.
 0.999
SER62995.1
Osmoprotectant transport system permease protein.
 
 
0.947
SES00652.1
WG containing repeat-containing protein.
  
 
 0.881
SER69350.1
Osmoprotectant transport system permease protein.
 
 
0.878
SER69304.1
Osmoprotectant transport system permease protein.
 
 
0.875
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
   
 0.789
SER69326.1
Osmoprotectant transport system substrate-binding protein.
 
 
 
 0.602
SER68032.1
Putative lysine transport system permease protein.
   
 
 0.593
SES06111.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
   
 
 0.593
SES09257.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
   
 
 0.593
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.