STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER80034.1Two component transcriptional regulator, LuxR family. (210 aa)    
Predicted Functional Partners:
SER80012.1
Two-component system, NarL family, sensor histidine kinase LiaS.
 0.998
SER62924.1
Signal transduction histidine kinase.
 0.974
SER79984.1
Predicted membrane protein.
 
  
 0.948
SER72249.1
Hypothetical protein.
 
 0.739
SES06486.1
Signal transduction histidine kinase.
 
 0.729
SER53288.1
Signal transduction histidine kinase.
 
 0.728
SER54574.1
Tetratricopeptide repeat-containing protein.
    
 0.719
SER79193.1
Tetratricopeptide repeat-containing protein.
    
 0.719
SER94503.1
Protein of unknown function.
    
 0.719
SES05872.1
Hypothetical protein.
    
 0.710
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.