STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER83727.1Signal transduction histidine kinase. (386 aa)    
Predicted Functional Partners:
SER83710.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.984
SER60537.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.943
SES09778.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.939
SES00556.1
Two-component system, OmpR family, response regulator VicR.
 0.937
SER53206.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.935
SES08640.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.934
SER61618.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.931
SER68687.1
Two-component system, OmpR family, response regulator ResD.
 0.930
SER99592.1
Two-component system, OmpR family, response regulator VanR.
 0.930
SER94633.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.929
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.