STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER85977.1Zinc transport system permease protein. (276 aa)    
Predicted Functional Partners:
SER85950.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
SER85963.1
Zinc transport system ATP-binding protein.
 0.999
SER67589.1
Iron/zinc/copper transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.925
SER67551.1
Iron/zinc/copper transport system ATP-binding protein.
 0.917
SER66628.1
Manganese/zinc/iron transport system ATP-binding protein.
 0.915
SER66599.1
Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.911
SER63297.1
ABC-type multidrug transport system, ATPase component.
  
 0.862
SER67565.1
Iron/zinc/copper transport system permease protein.
  
  
 
0.729
SER66650.1
Manganese/zinc/iron transport system permease protein.
  
  
 
0.728
SER66667.1
Manganese/zinc/iron transport system permease protein.
  
  
 
0.659
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.