STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER86963.1Phytoene dehydrogenase-related protein. (496 aa)    
Predicted Functional Partners:
SER86950.1
DNA-binding transcriptional regulator, AcrR family.
    
 0.851
SER93499.1
Hypothetical protein.
    
 0.659
SER78948.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.637
SER62278.1
Glycosyltransferase involved in cell wall bisynthesis.
    
 0.578
SER73702.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.570
SER81100.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.562
SER60626.1
Oxygen-dependent protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
   
 
 0.558
SER64757.1
Methyltransferase domain-containing protein.
  
 
 0.544
SER84172.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.544
SER97433.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.544
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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