STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER88154.1Putative NADPH-quinone reductase (modulator of drug activity B). (189 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.824
SER88167.1
DNA-binding transcriptional regulator, MerR family.
  
    0.786
SER88180.1
Cytosine/adenosine deaminase.
 
    0.595
SER53122.1
Aspartate/methionine/tyrosine aminotransferase.
   
    0.513
SER69175.1
Aspartate/methionine/tyrosine aminotransferase.
   
    0.513
SER93299.1
Aromatic amino acid aminotransferase apoenzyme.
   
    0.513
SER69874.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
  
 
  0.483
SER50905.1
Reactive intermediate/imine deaminase.
    
  0.439
SER95928.1
Endoribonuclease L-PSP.
    
  0.439
SER51591.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
    
  0.405
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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