Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER90139.1 | SES05356.1 | SAMN04488559_1106 | SAMN04488559_1238 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Hypothetical protein; Belongs to the UPF0178 family. | 0.513 |
SER90139.1 | minC | SAMN04488559_1106 | SAMN04488559_10421 | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.518 |
SER97938.1 | SES05356.1 | SAMN04488559_11453 | SAMN04488559_1238 | [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. | Hypothetical protein; Belongs to the UPF0178 family. | 0.515 |
SES05345.1 | SES05356.1 | SAMN04488559_1237 | SAMN04488559_1238 | Protein PsiE; Belongs to the PsiE family. | Hypothetical protein; Belongs to the UPF0178 family. | 0.431 |
SES05345.1 | SES05368.1 | SAMN04488559_1237 | SAMN04488559_1239 | Protein PsiE; Belongs to the PsiE family. | MFS transporter, DHA1 family, multidrug resistance protein. | 0.702 |
SES05356.1 | SER90139.1 | SAMN04488559_1238 | SAMN04488559_1106 | Hypothetical protein; Belongs to the UPF0178 family. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.513 |
SES05356.1 | SER97938.1 | SAMN04488559_1238 | SAMN04488559_11453 | Hypothetical protein; Belongs to the UPF0178 family. | [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. | 0.515 |
SES05356.1 | SES05345.1 | SAMN04488559_1238 | SAMN04488559_1237 | Hypothetical protein; Belongs to the UPF0178 family. | Protein PsiE; Belongs to the PsiE family. | 0.431 |
SES05356.1 | SES05368.1 | SAMN04488559_1238 | SAMN04488559_1239 | Hypothetical protein; Belongs to the UPF0178 family. | MFS transporter, DHA1 family, multidrug resistance protein. | 0.732 |
SES05356.1 | minC | SAMN04488559_1238 | SAMN04488559_10421 | Hypothetical protein; Belongs to the UPF0178 family. | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.522 |
SES05368.1 | SES05345.1 | SAMN04488559_1239 | SAMN04488559_1237 | MFS transporter, DHA1 family, multidrug resistance protein. | Protein PsiE; Belongs to the PsiE family. | 0.702 |
SES05368.1 | SES05356.1 | SAMN04488559_1239 | SAMN04488559_1238 | MFS transporter, DHA1 family, multidrug resistance protein. | Hypothetical protein; Belongs to the UPF0178 family. | 0.732 |
minC | SER90139.1 | SAMN04488559_10421 | SAMN04488559_1106 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. | 0.518 |
minC | SES05356.1 | SAMN04488559_10421 | SAMN04488559_1238 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | Hypothetical protein; Belongs to the UPF0178 family. | 0.522 |