STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES09249.1Amino acid ABC transporter ATP-binding protein, PAAT family. (242 aa)    
Predicted Functional Partners:
SES09257.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 0.998
SES06111.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 0.995
SER81034.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.994
SER71923.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.990
SER68032.1
Putative lysine transport system permease protein.
 0.982
SER63073.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.976
SER63091.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.976
SER52194.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.906
SES08314.1
Peptide/nickel transport system permease protein.
 
    
 0.902
SER87971.1
Putative ABC transport system permease protein.
 
      0.899
Your Current Organism:
Isobaculum melis
NCBI taxonomy Id: 142588
Other names: CCUG 37660, DSM 13760, I. melis, Isobaculum melis Collins et al. 2002, strain M577-94
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.