STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL81019.1Transposase (fragment). (136 aa)    
Predicted Functional Partners:
CDL83657.1
Transposase.
 
     0.616
CDL81773.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.596
CDL82320.1
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.578
CDL81018.1
Hypothetical protein; No homology to any previously reported sequences.
       0.572
CDL80937.1
Transposase (fragment).
  
     0.560
CDL83382.1
Transposase (fragment).
  
     0.560
CDL81020.1
Addiction module toxin.
       0.451
CDL81021.1
Putative addiction module antidote protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.426
CDL83633.1
TnpA (fragment).
  
     0.415
Your Current Organism:
Xenorhabdus szentirmaii
NCBI taxonomy Id: 1427518
Other names: X. szentirmaii DSM 16338, Xenorhabdus szentirmaii DSM 16338
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