STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK22189.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AHK22188.1
Hypothetical protein.
       0.773
tyrS
Tyrosine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.709
pepA
Glutamyl aminopeptidase.
       0.628
AHK22191.1
Sigma70, region containing protein.
       0.526
AHK22185.1
DegV domain-containing protein.
       0.442
AHK22186.1
DegV domain-containing protein MG326 homolog; DegV-like protein.
       0.442
Your Current Organism:
Hepatoplasma crinochetorum
NCBI taxonomy Id: 1427984
Other names: C. Hepatoplasma crinochetorum Av, Candidatus Hepatoplasma crinochetorum Av
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.