STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ31430.1HD domain-containing protein. (308 aa)    
Predicted Functional Partners:
SJZ49337.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.815
SJZ38082.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.721
SJZ31433.1
Hypothetical protein.
       0.675
SJZ56594.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.627
SJZ44831.1
Adenylate cyclase.
    
  0.618
SJZ31426.1
N-acetylglucosamine-6-phosphate deacetylase.
       0.610
SJZ30712.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.609
SJZ97495.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.553
SJZ52768.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
  0.528
SJZ30709.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
      0.460
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.