STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36908.11,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family. (531 aa)    
Predicted Functional Partners:
SJZ41940.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.971
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
  0.925
SJZ36897.1
Hypothetical protein.
 
     0.911
SJZ51945.1
Hypothetical protein.
 
     0.778
SJZ36983.1
4-alpha-glucanotransferase.
    
 0.769
SJZ41981.1
Protein of unknown function.
 
     0.767
SJZ36956.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
    
 0.754
SJZ51575.1
Starch phosphorylase.
    
 0.679
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.676
SJZ45248.1
Glucoamylase.
 
  
  0.668
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.