STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ36998.1CbiX protein. (121 aa)    
Predicted Functional Partners:
SJZ66573.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.980
SJZ37034.1
precorrin-8X methylmutase.
   
 0.972
SJZ66655.1
Precorrin-2 dehydrogenase.
  
 
 0.955
SJZ37109.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.943
SJZ37153.1
Cobalt-precorrin 5A acetaldehyde-lyase.
 
  
 0.942
SJZ37069.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.921
SJZ37084.1
Cobalt-precorrin 7 C15-methyltransferase.
 
  
 0.910
cbiD
Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
   
 0.899
SJZ37184.1
precorrin-3B C17-methyltransferase.
 
  
 0.871
SJZ37202.1
precorrin-6A/cobalt-precorrin-6A reductase.
 
  
 0.840
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.