STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (496 aa)    
Predicted Functional Partners:
SJZ40462.1
6-phosphogluconate dehydrogenase.
  
 0.996
SJZ94481.1
PTS system D-glucosamine-specific IIA component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIB component, Glc family (TC 4.A.1.1.6)/PTS system D-glucosamine-specific IIC component, Glc family (TC 4.A.1.1.6).
    
 0.953
SJZ97495.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.951
SJZ40435.1
Kynurenine formamidase.
     0.927
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.923
SJZ41583.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.878
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 0.875
SKA05435.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  0.873
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.831
SJZ42094.1
Glucokinase.
  
 
 0.791
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.