STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ53917.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
SJZ60142.1
Tetratricopeptide repeat-containing protein.
  
     0.666
SJZ44805.1
FecR family protein.
  
     0.652
SJZ46766.1
Hypothetical protein.
  
     0.629
SJZ41042.1
Hypothetical protein.
  
     0.590
SJZ63726.1
Lipopolysaccharide export system permease protein.
  
   
 0.557
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
       0.529
SJZ53983.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.529
SJZ54019.1
Homoserine dehydrogenase.
       0.529
SJZ54041.1
Chorismate mutase; Belongs to the UPF0735 family.
       0.485
SJZ33745.1
Putative redox-active protein (C_GCAxxG_C_C).
  
     0.437
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.