STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ57929.1trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC. (173 aa)    
Predicted Functional Partners:
SJZ49282.1
Cytochrome c3.
 
 0.912
SJZ38427.1
Seven times multi-haem cytochrome CxxCH.
  
  
  0.851
SJZ58690.1
Doubled CXXCH domain-containing protein.
 
  
 0.744
SJZ58708.1
Cytochrome b subunit of formate dehydrogenase.
 
  
 0.740
SJZ57917.1
Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.732
SJZ30310.1
Cytochrome c nitrite reductase, small subunit.
  
  
 
0.720
SJZ58004.1
Transporter family-2 protein.
 
     0.699
SJZ75287.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.694
SJZ49740.1
Cytochrome c554 and c-prime.
  
 0.684
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.681
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.