STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66797.1NapC/NirT cytochrome c family, N-terminal region. (175 aa)    
Predicted Functional Partners:
SJZ49282.1
Cytochrome c3.
 
 0.913
SJZ58690.1
Doubled CXXCH domain-containing protein.
 
  
 0.769
SJZ58708.1
Cytochrome b subunit of formate dehydrogenase.
 
  
 0.759
SJZ49593.1
Doubled CXXCH domain-containing protein.
 
 0.750
SJZ49740.1
Cytochrome c554 and c-prime.
  
 0.684
SJZ66748.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.670
SJZ49721.1
Doubled CXXCH domain-containing protein.
  
     0.663
SJZ66821.1
Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
    0.658
SJZ80384.1
Cytochrome c554 and c-prime.
  
     0.615
napA
Nitrate reductase NapA; Catalytic subunit of the nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
 0.604
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.