STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ81604.1NAD(P)-dependent iron-only hydrogenase iron-sulfur protein. (119 aa)    
Predicted Functional Partners:
SJZ32300.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.947
SJZ44868.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.947
SJZ70855.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
  
 0.947
SJZ67419.1
Iron only hydrogenase large subunit, C-terminal domain.
 
 
 0.926
SJZ81627.1
NADH-quinone oxidoreductase subunit E.
  
 0.900
SJZ81651.1
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
 
  
 0.889
SJZ81675.1
Formate dehydrogenase (NADP) alpha subunit.
  
 0.882
SJZ81708.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.872
SJZ67349.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
   
 0.787
SJZ67406.1
DRTGG domain-containing protein.
 
   
 0.786
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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