STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ86822.1Methyl-accepting chemotaxis sensory transducer with TarH sensor. (571 aa)    
Predicted Functional Partners:
SJZ59331.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.930
SJZ30204.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.923
SJZ64615.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.923
SJZ40953.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.922
SJZ30206.1
Purine-binding chemotaxis protein CheW.
 
 0.919
SJZ64630.1
Purine-binding chemotaxis protein CheW.
 
 0.916
SJZ40935.1
Purine-binding chemotaxis protein CheW.
 
 0.892
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 0.873
SJZ49540.1
Chemotaxis protein methyltransferase CheR.
 0.830
SJZ40910.1
Chemotaxis protein methyltransferase CheR.
 0.784
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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