STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ88140.1MFS transporter, ACDE family, multidrug resistance protein. (414 aa)    
Predicted Functional Partners:
SJZ88266.1
Protein of unknown function.
 
     0.801
SJZ88251.1
Phosphosulfolactate synthase.
 
     0.762
SJZ88026.1
Electron transfer flavoprotein-quinone oxidoreductase.
  
  
 0.732
SJZ88091.1
Ferredoxin like protein.
       0.718
SJZ31325.1
Protein of unknown function.
  
    0.692
SJZ88193.1
Uncharacterized membrane protein, DUF441 family.
 
     0.677
SJZ32205.1
Sporulation protein YtrH.
  
    0.671
SJZ32617.1
Protein of unknown function.
  
     0.627
SJZ53902.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
  0.622
SJZ48692.1
Uncharacterized membrane protein, DUF441 family.
 
     0.547
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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