STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ97581.1Protein kinase domain-containing protein. (311 aa)    
Predicted Functional Partners:
SJZ97593.1
Serine/threonine protein phosphatase PrpC.
 
 0.971
SJZ97604.1
Serine/threonine protein phosphatase PrpC.
 
 0.948
SJZ97613.1
FHA domain-containing protein.
 
 
 
 0.923
SJZ30885.1
Protein phosphatase.
 
 0.896
SJZ97627.1
FHA domain-containing protein.
   
 
 0.869
SJZ44831.1
Adenylate cyclase.
 
  
 0.742
SJZ59331.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.733
SJZ97495.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.733
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.732
SJZ84319.1
PAS domain-containing protein.
    
 0.638
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.