Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ31376.1 | SJZ46669.1 | SAMN02745118_00211 | SAMN02745118_00910 | (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. | UDP-glucose 4-epimerase. | 0.442 |
| SJZ31376.1 | SKA04447.1 | SAMN02745118_00211 | SAMN02745118_02599 | (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. | Predicted O-methyltransferase YrrM. | 0.501 |
| SJZ31376.1 | SKA09536.1 | SAMN02745118_00211 | SAMN02745118_02786 | (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 0.760 |
| SJZ46669.1 | SJZ31376.1 | SAMN02745118_00910 | SAMN02745118_00211 | UDP-glucose 4-epimerase. | (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase. | 0.442 |
| SJZ46669.1 | SKA04447.1 | SAMN02745118_00910 | SAMN02745118_02599 | UDP-glucose 4-epimerase. | Predicted O-methyltransferase YrrM. | 0.451 |
| SJZ46669.1 | SKA09536.1 | SAMN02745118_00910 | SAMN02745118_02786 | UDP-glucose 4-epimerase. | UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase. | 0.696 |
| SJZ59450.1 | SKA04447.1 | SAMN02745118_01287 | SAMN02745118_02599 | Putative protease. | Predicted O-methyltransferase YrrM. | 0.615 |
| SJZ96464.1 | SKA04447.1 | SAMN02745118_02360 | SAMN02745118_02599 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Predicted O-methyltransferase YrrM. | 0.489 |
| SKA04377.1 | SKA04397.1 | SAMN02745118_02595 | SAMN02745118_02596 | Hypothetical protein. | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.577 |
| SKA04377.1 | SKA04447.1 | SAMN02745118_02595 | SAMN02745118_02599 | Hypothetical protein. | Predicted O-methyltransferase YrrM. | 0.451 |
| SKA04397.1 | SKA04377.1 | SAMN02745118_02596 | SAMN02745118_02595 | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.577 |
| SKA04397.1 | SKA04414.1 | SAMN02745118_02596 | SAMN02745118_02597 | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Protein of unknown function. | 0.556 |
| SKA04397.1 | SKA04434.1 | SAMN02745118_02596 | SAMN02745118_02598 | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative protease. | 0.610 |
| SKA04397.1 | SKA04447.1 | SAMN02745118_02596 | SAMN02745118_02599 | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Predicted O-methyltransferase YrrM. | 0.644 |
| SKA04397.1 | mltG | SAMN02745118_02596 | SAMN02745118_02600 | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.514 |
| SKA04414.1 | SKA04397.1 | SAMN02745118_02597 | SAMN02745118_02596 | Protein of unknown function. | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.556 |
| SKA04414.1 | SKA04434.1 | SAMN02745118_02597 | SAMN02745118_02598 | Protein of unknown function. | Putative protease. | 0.802 |
| SKA04414.1 | SKA04447.1 | SAMN02745118_02597 | SAMN02745118_02599 | Protein of unknown function. | Predicted O-methyltransferase YrrM. | 0.765 |
| SKA04414.1 | mltG | SAMN02745118_02597 | SAMN02745118_02600 | Protein of unknown function. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.568 |
| SKA04434.1 | SKA04397.1 | SAMN02745118_02598 | SAMN02745118_02596 | Putative protease. | RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.610 |
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