STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA07755.1Electron transfer flavoprotein-quinone oxidoreductase. (432 aa)    
Predicted Functional Partners:
SKA07776.1
Ferredoxin like protein.
 
 
 0.981
SKA07725.1
Electron transfer flavoprotein beta subunit.
 
 
 0.960
SKA07739.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 
 0.950
SJZ88091.1
Ferredoxin like protein.
 
 
 0.920
SJZ85508.1
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.629
SKA06133.1
Iron-sulfur cluster-binding protein.
 
  
  0.609
SJZ68008.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
  
 
 0.464
SKA07700.1
Methyltransferase domain-containing protein.
  
  
 0.409
SJZ34379.1
Tetratricopeptide repeat-containing protein.
     
 0.404
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.