STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA08035.1Trk system potassium uptake protein TrkH. (447 aa)    
Predicted Functional Partners:
SKA08055.1
Trk system potassium uptake protein TrkA.
 
 0.986
SKA08179.1
Trk system potassium uptake protein TrkA.
 
 0.969
SKA08118.1
Trk system potassium uptake protein TrkA.
  
 
 0.758
SKA08134.1
Trk system potassium uptake protein TrkA.
  
 
 0.747
SJZ51803.1
Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.719
SKA05435.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.691
SJZ57602.1
Hypothetical protein.
  
 
 0.613
SJZ88707.1
Trk system potassium uptake protein TrkA.
  
 
 0.613
SJZ93241.1
Trk system potassium uptake protein TrkA.
  
 
 0.613
SKA08070.1
PAS domain S-box-containing protein.
       0.551
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.