STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA11280.1NitT/TauT family transport system permease protein. (217 aa)    
Predicted Functional Partners:
SKA11266.1
NitT/TauT family transport system ATP-binding protein.
 
 0.981
SKA11293.1
NitT/TauT family transport system substrate-binding protein.
 
 0.977
SJZ30794.1
Sulfonate transport system substrate-binding protein.
 
 0.968
SJZ30803.1
NitT/TauT family transport system ATP-binding protein.
 
 0.953
SJZ37773.1
NitT/TauT family transport system ATP-binding protein.
 
 0.938
SJZ37761.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.705
SKA11321.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.599
SJZ37784.1
NitT/TauT family transport system permease protein.
 
    
0.480
Your Current Organism:
Selenihalanaerobacter shriftii
NCBI taxonomy Id: 142842
Other names: ATCC BAA-73, S. shriftii, Selenihalanaerobacter shriftii Switzer Blum et al. 2001, Selenohalobacter shriftii, strain DSSe-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.