STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001005085_04510Unannotated protein. (359 aa)    
Predicted Functional Partners:
GCA_001005085_04511
Unannotated protein.
     
 0.741
GCA_001005085_04512
Unannotated protein.
       0.738
GCA_001005085_04508
Unannotated protein.
 
    
0.697
GCA_001005085_04677
Unannotated protein.
    
 0.667
GCA_001005085_05936
Unannotated protein.
    
  0.644
GCA_001005085_04660
Unannotated protein.
    
  0.606
GCA_001005085_06970
Unannotated protein.
    
  0.606
GCA_001005085_04957
Unannotated protein.
  
 
   0.591
GCA_001005085_04504
Unannotated protein.
       0.554
GCA_001005085_08558
Unannotated protein.
  
     0.545
Your Current Organism:
Streptomyces humi
NCBI taxonomy Id: 1428620
Other names: DSM 42174, MCCC 1K00505, S. humi, Streptomyces sp. MUSC 119, strain MUSC 119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.