STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001005085_04642Unannotated protein. (765 aa)    
Predicted Functional Partners:
GCA_001005085_06023
Unannotated protein.
  
  
 
0.867
GCA_001005085_05975
Unannotated protein.
  
  
 
0.857
GCA_001005085_06501
Unannotated protein.
 
  
 0.856
GCA_001005085_02749
Unannotated protein.
  
  
  0.848
GCA_001005085_02750
Unannotated protein.
  
  
  0.844
GCA_001005085_05143
Unannotated protein.
  
  
 0.834
GCA_001005085_08626
Unannotated protein.
    
 0.825
GCA_001005085_03394
Unannotated protein.
    
 0.821
GCA_001005085_06556
Unannotated protein.
  
  
 
0.807
GCA_001005085_07840
Unannotated protein.
  
  
 
0.804
Your Current Organism:
Streptomyces humi
NCBI taxonomy Id: 1428620
Other names: DSM 42174, MCCC 1K00505, S. humi, Streptomyces sp. MUSC 119, strain MUSC 119
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.