STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX15001.1Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
KIX11064.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.991
KIX11065.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.991
KIX15257.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.907
KIX12326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.891
KIX11152.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.891
KIX13462.1
Hdr menaquinol oxidoreductase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.835
KIX11198.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.833
KIX13461.1
Menaquinol oxidoreductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.832
KIX11068.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.830
KIX15170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.823
Your Current Organism:
Dethiosulfatarculus sandiegensis
NCBI taxonomy Id: 1429043
Other names: D. sandiegensis, DSM 100305, Deltaproteobacteria bacterium SPR, Desulfarculus sp. SPR, Dethiosulfatarculus sandiegensis Davidova et al. 2016, JCM 30857, strain SPR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.