STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX14916.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (309 aa)    
Predicted Functional Partners:
KIX15125.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.636
KIX14915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
KIX14243.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.555
KIX13063.1
Cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.555
lipB
Hypothetical protein; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.527
KIX14149.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.514
KIX15092.1
3-oxoadipate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.451
KIX14234.1
Glutaconate CoA-transferase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.451
KIX13375.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.435
KIX11471.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.435
Your Current Organism:
Dethiosulfatarculus sandiegensis
NCBI taxonomy Id: 1429043
Other names: D. sandiegensis, DSM 100305, Deltaproteobacteria bacterium SPR, Desulfarculus sp. SPR, Dethiosulfatarculus sandiegensis Davidova et al. 2016, JCM 30857, strain SPR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.